Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015831340.1_cds_XP_016504484.1_17924
CDS Infomation

[gene=LOC107822446] [db_xref=GeneID:107822446] [protein=pentatricopeptide repeat-containing protein At4g02750-like] [protein_id=XP_016504484.1] [location=19118..20686] [gbkey=CDS]
Sequence

ATGCACGAGCTGCGCACCTTTGCTGTTTGCCGCCAAATTTCTACCCTTTCGACGATTAAT
TTAAACAAAACGATCAACAGCTTTGTAGCAAACGGAAACCTCAAAGAAGCTCGCAAACTC
TTCGATCAAAGCGCCCACTCAAGAAACGTCGTATCATGGAATTCAATTATCGTTGGCTAC
TTCAGACACAGCTGCACCCAACAAGCCGAGTACCTGTTCGACGGAATGCCTCACCGAGAT
GTCGTTTCTTGGAACACCATGCTTTCCGGATATCGCAATGCTAACAACCCAGAAAAAGTC
TATAATTGCTTTCTGCATATGAACAGATATGGAGGCAGACCCAATGAGCTCACTTTCGCA
GTAGCAATTAGCTCCTTCTTGCATAAAGATTTCAAGCATTTGGTCCCACAGCTTCATGGT
CTTGTGCTTAGTTTGGGGATAAGTCTCAATATCTTTGTAGGGTCAGCATTGATGAGGGGT
TATATTGATTTAGATGATTACAAAGGTTTAGCTCGAGTTTTCGATGAGATTTTGGTTAAA
GATGTTACGCCGTGGAACGTGCTGATTTTGGGCTATATGAAATTTGGGTGCACAGGTGAG
GCTCAGAGGGCTTTTGATATGATGCCTATGAGAAATGCTTTTACTTGGAGTACTTTGATC
AATGGGTACATTGAAAACAAGAAGCTTAATGAAGCTCGGTCCCTTTTTGATAAGATGAGT
GAGAAAGATGTGGTTTCTTGGACAGCAATGATAAGAGGGTATGTGCAGTATGGAGACTTT
ATGGAGGCTTTGAAATTGTTTAAGGTGATGTTGAGCTCAGGAGCTCGTCCTAATCATTTT
ACATTTTCAACTGTTTTAGATGCCTGCGCTGGTAACTCTGCTGTTCTTGTGGGTAATCAA
GTTCACTCTTGCATCTTGAAGTCTGGTTTCCCTCTTGATGTCGTCTTGTTGACCTCCCTT
GTTGACATGTATGCAAAATGCGGCGACATTGACATTGCATTCTGCATTTTTGAGTCCATC
CCTGAAAGGAATTTGGTAGCTTGGAATTCAATCATTGGGGGTTATGCGAGACACGGGCTT
CCAGAGAGGGCAATGCAGGAGTTTGAAAGGATGGTGAAGAGTGGTATTAGGCCTGACGAA
ATTACTTTTATTAATTTGGTCTATGCATGTGGCCATGGTGGACTAGTCGAAGAAGGTGAG
AGAATTTTCAACTCTATGGTAACGGATTACGGTTTGAAAGCAGAGATGGAACACTATGCA
TGTATGGTGGACTTGTATGGAAAGGCAGGTCAGCTTGAGAAAGCAGAGAAATTGATAGAG
GGGATGCCTTTTAAGCCTGATGTGGTGGTCTGGGGGGCGTTGTTGGGAGCCTGTGGCTTG
CACTCGTGTCTAGAGCTCGGAGAGATTGCAGCAAATGGAATCTACACATTGGAGAATGAC
CATCCTGCAGTATATTCTGTTCTTTCTAAAATCTACGGTAACAAAGGAGTGTGCAGTGAC
ATAACTGGTTTGGAGAAGTTGATGAAGAATTGGCGCGCTAGAAAGCAGAAAGCTGGTAGT
TGGATTTAA

Peptide Sequence

PEP ID

XP_016504484.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like [Nicotiana tabacum]
Sequence

MHELRTFAVCRQISTLSTINLNKTINSFVANGNLKEARKLFDQSAHSRNVVSWNSIIVGY
FRHSCTQQAEYLFDGMPHRDVVSWNTMLSGYRNANNPEKVYNCFLHMNRYGGRPNELTFA
VAISSFLHKDFKHLVPQLHGLVLSLGISLNIFVGSALMRGYIDLDDYKGLARVFDEILVK
DVTPWNVLILGYMKFGCTGEAQRAFDMMPMRNAFTWSTLINGYIENKKLNEARSLFDKMS
EKDVVSWTAMIRGYVQYGDFMEALKLFKVMLSSGARPNHFTFSTVLDACAGNSAVLVGNQ
VHSCILKSGFPLDVVLLTSLVDMYAKCGDIDIAFCIFESIPERNLVAWNSIIGGYARHGL
PERAMQEFERMVKSGIRPDEITFINLVYACGHGGLVEEGERIFNSMVTDYGLKAEMEHYA
CMVDLYGKAGQLEKAEKLIEGMPFKPDVVVWGALLGACGLHSCLELGEIAANGIYTLEND
HPAVYSVLSKIYGNKGVCSDITGLEKLMKNWRARKQKAGSWI

Transcript Sequence

Gene sequence data has not been registered.